Hierarchical geometric deep learning enables scalable analysis of molecular dynamics.
Hierarchical geometric deep learning enables scalable analysis of molecular dynamics. J Chem Phys. 2026 Aug 14; 165(6).
PMID: 42573031
A centrin-Sfi1 myoneme fishnet powers ultrafast calcium-triggered contraction in the giant ciliate Spirostomum ambiguum.
A centrin-Sfi1 myoneme fishnet powers ultrafast calcium-triggered contraction in the giant ciliate Spirostomum ambiguum. Proc Natl Acad Sci U S A. 2026 Jun 02; 123(22):e2601408123.
PMID: 42213749
Adaptive Tensor Train Metadynamics for High-Dimensional Free Energy Exploration.
Adaptive Tensor Train Metadynamics for High-Dimensional Free Energy Exploration. J Chem Theory Comput. 2026 Jun 09; 22(11):5420-5434.
PMID: 42201801
An underlying bistability sets amplitude and explains temperature compensation in the cyanobacterial circadian clock.
An underlying bistability sets amplitude and explains temperature compensation in the cyanobacterial circadian clock. bioRxiv. 2026 May 05.
PMID: 42146552
The scientific legacy of Martin Karplus from the perspective of his collaborators.
The scientific legacy of Martin Karplus from the perspective of his collaborators. Biophys J. 2026 Aug 18; 125(16):4065-4096.
PMID: 41928473
Light-induced assembly and repeatable actuation in Ca2+-driven chemomechanical protein networks.
Light-induced assembly and repeatable actuation in Ca2+-driven chemomechanical protein networks. Nat Commun. 2026 Feb 21; 17(1).
PMID: 41723139
Chronic infections can generate SARS-CoV-2-like bursts of viral evolution without epistasis.
Chronic infections can generate SARS-CoV-2-like bursts of viral evolution without epistasis. Virus Evol. 2026; 12(1):veag008.
PMID: 41878356
An Exact Multiple-Time-Step Variational Formulation for the Committor and the Transition Rate.
An Exact Multiple-Time-Step Variational Formulation for the Committor and the Transition Rate. J Phys Chem B. 2026 Jan 08; 130(1):155-170.
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Actin network heterogeneity tunes activator-inhibitor dynamics at the cell cortex.
Actin network heterogeneity tunes activator-inhibitor dynamics at the cell cortex. Proc Natl Acad Sci U S A. 2025 Dec 16; 122(50):e2520485122.
PMID: 41359843
Tau-Driven Coordination of Microtubule-Actin Crosstalk in Cell-Sized Vesicles.
Tau-Driven Coordination of Microtubule-Actin Crosstalk in Cell-Sized Vesicles. bioRxiv. 2025 Nov 16.
PMID: 40832176